Stem-loop sequence mmu-mir-466c-2

Accession MI0014057
Symbol MGI:Mir466c-2
Description Mus musculus miR-466c-2 stem-loop
Gene family MIPF0000208; mir-466
Stem-loop 
u    --         -g           c     ca      aau 
 gugu  auauguguu  augugugugug augua  uaugug   a
 ||||  |||||||||  ||||||||||| |||||  ||||||   u
 cacg  uauacacag  uacacacgcac uacau  auacau   g
a    ag         aa           a     --      aua
Get sequence
Deep sequencing
11013 reads, 85 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr2: 10483966-10484055 [+]
sense
OTTMUST00000026263 ; Sfmbt2-001; intron 10
ENSMUST00000041105 ; Sfmbt2-001; intron 10
ENSMUST00000116594 ; Sfmbt2-201; intron 11
Clustered miRNAs
< 10kb from mmu-mir-466c-2
mmu-mir-466b-1 chr2: 10474219-10474300 [+]
mmu-mir-669a-3 chr2: 10474433-10474541 [+]
mmu-mir-669k chr2: 10475300-10475426 [+]
mmu-mir-467a-1 chr2: 10476346-10476418 [+]
mmu-mir-466b-8 chr2: 10476628-10476713 [+]
mmu-mir-669a-1 chr2: 10476853-10476949 [+]
mmu-mir-669g chr2: 10477150-10477272 [+]
mmu-mir-669j chr2: 10477910-10478030 [+]
mmu-mir-467a-2 chr2: 10478798-10478880 [+]
mmu-mir-466e chr2: 10479088-10479171 [+]
mmu-mir-669a-4 chr2: 10479315-10479401 [+]
mmu-mir-467b chr2: 10481248-10481320 [+]
mmu-mir-466c-1 chr2: 10481534-10481617 [+]
mmu-mir-669a-5 chr2: 10481761-10481847 [+]
mmu-mir-467a-3 chr2: 10483678-10483760 [+]
mmu-mir-466c-2 chr2: 10483966-10484055 [+]
mmu-mir-669a-6 chr2: 10484196-10484282 [+]
mmu-mir-467a-4 chr2: 10486135-10486217 [+]
mmu-mir-466b-4 chr2: 10486423-10486512 [+]
mmu-mir-669a-7 chr2: 10486653-10486739 [+]
mmu-mir-467a-5 chr2: 10488599-10488681 [+]
mmu-mir-466b-5 chr2: 10488887-10488974 [+]
mmu-mir-669p-1 chr2: 10489116-10489202 [+]
mmu-mir-467a-6 chr2: 10491048-10491130 [+]
mmu-mir-669a-8 chr2: 10491566-10491652 [+]
mmu-mir-467a-7 chr2: 10493510-10493592 [+]
mmu-mir-466b-6 chr2: 10493798-10493887 [+]
Database links

Mature sequence mmu-miR-466c-5p

Accession MIMAT0004877
Sequence

14 -  

ugaugugugugugcauguacauau

 - 37

Get sequence
Deep sequencing 8730 reads, 71 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-466c-3p

Accession MIMAT0004878
Sequence

55 -  

auacauacacgcacacauaaga

 - 76

Get sequence
Deep sequencing 12990 reads, 77 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).