Stem-loop sequence mmu-mir-466o

Accession MI0014052
Description Mus musculus miR-466o stem-loop
Gene family MIPF0000316; mir-467
Stem-loop 
u    --         ga          --c     ---     g 
 gugu  guauguguu  ugugugugua   augua   caugu u
 ||||  |||||||||  ||||||||||   |||||   |||||  
 cacg  uauacacag  auacacacgu   uacau   guaua g
a    ag         -a          aca     aua     a
Get sequence
Deep sequencing
7633 reads, 85 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr2: 10472540-10472623 [+]
sense
OTTMUST00000026263 ; Sfmbt2-001; intron 10
ENSMUST00000041105 ; Sfmbt2-001; intron 10
ENSMUST00000116594 ; Sfmbt2-201; intron 11
Clustered miRNAs
< 10kb from mmu-mir-466o
mmu-mir-466m chr2: 10466663-10466746 [+]
mmu-mir-466f-1 chr2: 10466944-10467037 [+]
mmu-mir-669f chr2: 10467229-10467349 [+]
mmu-mir-669e chr2: 10467495-10467613 [+]
mmu-mir-669b chr2: 10467790-10467886 [+]
mmu-mir-669d chr2: 10468343-10468463 [+]
mmu-mir-466f-2 chr2: 10468675-10468768 [+]
mmu-mir-669l chr2: 10468971-10469068 [+]
mmu-mir-669d-2 chr2: 10471644-10471729 [+]
mmu-mir-466f-3 chr2: 10471953-10472046 [+]
mmu-mir-297a-2 chr2: 10472254-10472343 [+]
mmu-mir-466o chr2: 10472540-10472623 [+]
mmu-mir-467c chr2: 10473931-10474027 [+]
mmu-mir-466b-1 chr2: 10474219-10474300 [+]
mmu-mir-669a-3 chr2: 10474433-10474541 [+]
mmu-mir-669k chr2: 10475300-10475426 [+]
mmu-mir-467a-1 chr2: 10476346-10476418 [+]
mmu-mir-466b-8 chr2: 10476628-10476713 [+]
mmu-mir-669a-1 chr2: 10476853-10476949 [+]
mmu-mir-669g chr2: 10477150-10477272 [+]
mmu-mir-669j chr2: 10477910-10478030 [+]
mmu-mir-467a-2 chr2: 10478798-10478880 [+]
mmu-mir-466e chr2: 10479088-10479171 [+]
mmu-mir-669a-4 chr2: 10479315-10479401 [+]
mmu-mir-467b chr2: 10481248-10481320 [+]
mmu-mir-466c-1 chr2: 10481534-10481617 [+]
mmu-mir-669a-5 chr2: 10481761-10481847 [+]
Database links

Mature sequence mmu-miR-466o-5p

Accession MIMAT0014885
Sequence

14 -  

ugauguguguguacauguacau

 - 35

Get sequence
Deep sequencing 3301 reads, 71 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-466o-3p

Accession MIMAT0014886
Sequence

50 -  

uacauacaugcacacauaagac

 - 71

Get sequence
Deep sequencing 4190 reads, 75 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).