Stem-loop sequence mmu-mir-466m

Accession MI0014050
Description Mus musculus miR-466m stem-loop
Gene family MIPF0000316; mir-467
Stem-loop 
u        u u        c     ca            aa 
 gugugugu c ugugugug augug  uguguguauaug  u
 |||||||| | |||||||| |||||  ||||||||||||   
 cacacaca g acgcacac uacac  acauacauauac  a
a        u c        a     --            au
Get sequence
Deep sequencing
4295 reads, 80 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr2: 10466663-10466746 [+]
sense
OTTMUST00000026263 ; Sfmbt2-001; intron 10
ENSMUST00000041105 ; Sfmbt2-001; intron 10
ENSMUST00000116594 ; Sfmbt2-201; intron 11
Clustered miRNAs
< 10kb from mmu-mir-466m
mmu-mir-466m chr2: 10466663-10466746 [+]
mmu-mir-466f-1 chr2: 10466944-10467037 [+]
mmu-mir-669f chr2: 10467229-10467349 [+]
mmu-mir-669e chr2: 10467495-10467613 [+]
mmu-mir-669b chr2: 10467790-10467886 [+]
mmu-mir-669d chr2: 10468343-10468463 [+]
mmu-mir-466f-2 chr2: 10468675-10468768 [+]
mmu-mir-669l chr2: 10468971-10469068 [+]
mmu-mir-669d-2 chr2: 10471644-10471729 [+]
mmu-mir-466f-3 chr2: 10471953-10472046 [+]
mmu-mir-297a-2 chr2: 10472254-10472343 [+]
mmu-mir-466o chr2: 10472540-10472623 [+]
mmu-mir-467c chr2: 10473931-10474027 [+]
mmu-mir-466b-1 chr2: 10474219-10474300 [+]
mmu-mir-669a-3 chr2: 10474433-10474541 [+]
mmu-mir-669k chr2: 10475300-10475426 [+]
mmu-mir-467a-1 chr2: 10476346-10476418 [+]
mmu-mir-466b-8 chr2: 10476628-10476713 [+]
Database links

Mature sequence mmu-miR-466m-5p

Accession MIMAT0014882
Sequence

15 -  

ugugugcaugugcauguguguau

 - 37

Get sequence
Deep sequencing 748 reads, 49 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-466m-3p

Accession MIMAT0014883
Sequence

51 -  

uacauacacacauacacacgca

 - 72

Get sequence
Deep sequencing 3522 reads, 68 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).