Stem-loop sequence cqu-mir-87

Accession MI0013627
Description Culex quinquefasciatus miR-87 stem-loop
Gene family MIPF0000152; mir-87
Stem-loop 
aa      -       ca        -      aa    ggu 
  gauugu cucuggc  gccugaag uuugcu  accu   u
  |||||| |||||||  |||||||| ||||||  ||||   c
  cuaaca gaggcug  uggacuuu aaacga  ugga   g
ca      a       ug        u      -g    acu
Get sequence
Deep sequencing
2327 reads, 1 experiments
Genome context
Coordinates (CpipJ1) Overlapping transcripts
supercont3.431: 379740-379823 [+]
intergenic

Mature sequence cqu-miR-87

Accession MIMAT0014439
Sequence

49 -  

gugagcaaauuuucaggugugu

 - 70

Get sequence
Deep sequencing 2326 reads, 1 experiments
Evidence experimental; Solexa [1]

References

1
PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).