Stem-loop sequence gra-MIR398

Accession MI0013535
Description Gossypium raimondii miR398 stem-loop
Gene family MIPF0000107; MIR398
Stem-loop 
-----------------  c      -guu               cc    a          uc  cccu 
                 gc aagaug    uaccccagaggggug  accu agaacacagg  au    u
                 || ||||||    |||||||||||||||  |||| ||||||||||  ||    a
                 cg uucuau    augggguuuccccac  ugga ucuuguguuc  ua    a
cguuuguuuucccuuac  c      auac               --    c          ga  aacc
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Mature sequence gra-miR398

Accession MIMAT0014328
Sequence

66 -  

uguguucucaggucaccccuu

 - 86

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Evidence experimental; Solexa [1]

References

1
PMID:19889219 "Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)" Pang M, Woodward AW, Agarwal V, Guan X, Ha M, Ramachandran V, Chen X, Triplett BA, Stelly DM, Chen ZJ Genome Biol. 10:R122(2009).