Stem-loop sequence aae-mir-2765

Accession MI0013490
Description Aedes aegypti miR-2765 stem-loop
Gene family MIPF0001008; mir-2765
Stem-loop 
-a      uc   a  c   u       - ca        gaua 
  aacguu  cgg gc ugg aacucca c  ccguuggc    u
  ||||||  ||| || ||| ||||||| |  ||||||||    u
  uugcaa  gcc ug gcc uugaggu g  gguaaccg    u
ac      --   g  c   c       c ag        acag
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Comments

This miRNA was experimentally identified in the closely related Aedes albopictus, for which there was no genome sequence, and therefore mapped to the Aedes aegypti genome [1].

Genome context
Coordinates (AaegL1) Overlapping transcripts
supercont1.1: 5248294-5248380 [+]
intergenic

Mature sequence aae-miR-2765

Accession MIMAT0014285
Sequence

17 -  

ugguaacuccaccaccguuggc

 - 38

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Evidence experimental; Solexa [1]

References

1
PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).