Stem-loop sequence aae-mir-137-2

AccessionMI0013481 (change log)
DescriptionAedes aegypti miR-137-2 stem-loop
Gene family MIPF0000106; mir-137
Literature search

1 open access papers mention aae-mir-137-2
(2 sentences)

Stem-loop
   uauucauc     a    g ug  c   c       ug   uau     c  ug 
5'         gagca cuug u  gc acg guauucu  ggu   uaaca ac  u
           ||||| |||| |  || ||| |||||||  |||   ||||| ||  u
3'         uuugu gaac a  ug ugc cauaaga  ucg   auugu ug  u
   ----acac     -    - gu  a   a       gu   -uu     -  ua 
Get sequence
Deep sequencing
11903 reads, 500 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Comments

This miRNA was identified independently in Aedes aegypti [1] and in the closely related Aedes albopictus, for which there was no genome sequence [2]. The latter reads were therefore also mapped to the Aedes aegypti genome [2].

Genome context
Coordinates (AaegL1) Overlapping transcripts
supercont1.137: 260667-260769 [-]
intergenic
Database links

Mature sequence aae-miR-137

Accession MIMAT0014274
Sequence

65 - 

uauugcuugagaauacacguag

 - 86

Get sequence
Deep sequencing22400 reads, 2 experiments
Evidence experimental; 454 [1], Illumina [2]

References

1
2
PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).