Stem-loop sequence ccl-MIR171

Accession MI0013301
Description Citrus clementine miR171 stem-loop
Gene family MIPF0000030; MIR171_1
Stem-loop 
gauc  uu        --aa        u      ac     ---     gauggauggguacucacgggauauuggugcgguucaauaagaaaacggugcucaauacuuuuugagcuccgcuuuuugauugagccgcgccaauaucacgugccacucgcucu 
    uc  ggggguua    augaagau guggug  cauuu   uggag                                                                                                                 c
    ||  ||||||||    |||||||| ||||||  |||||   |||||                                                                                                                 u
    ag  uucccagu    uauuuuug uacuac  guaga   accuc                                                                                                                 a
-uua  cu        auug        u      --     uuu     gguuaacuugucauuuuaaauuugucuucguuauucgaucuuaaaauuaaauuuggggaugaauggacuggaguuguauuaaugcgcgaggggacacgaauuuucuuucguua
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Mature sequence ccl-miR171

Accession MIMAT0014075
Sequence

122 -  

ugauugagccgcgccaauauc

 - 142

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Evidence experimental; Northern [1]

References

1
PMID:19585144 "Identification and characterization of 27 conserved microRNAs in citrus" Song C, Fang J, Li X, Liu H, Thomas Chao C Planta. 230:671-685(2009).