Stem-loop sequence ssc-mir-345-1

Accession MI0013117
Previous IDs ssc-mir-345
Description Sus scrofa miR-345-1 stem-loop
Gene family MIPF0000189; mir-345
Stem-loop 
--           g u          c   u   ug g u 
  aacccaggucu c gacuccuagu cag gcu  u a g
  ||||||||||| | |||||||||| ||| |||  | |  
  uuggguccgga g cuggggauca guc cgg  g u g
gu           g u          a   c   gu g c
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Genome context
Coordinates (Sscrofa9) Overlapping transcripts
7: 130435923-130436002 [+]
sense
Database links
  • ENTREZGENE: 100498719;MIR345

Mature sequence ssc-miR-345-5p

Accession MIMAT0013899
Sequence

12 -  

gcugacuccuaguccagugc

 - 31

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Evidence experimental; Solexa [1,3], cloned [2]

Mature sequence ssc-miR-345-3p

Accession MIMAT0013900
Sequence

49 -  

cccugaacuaggggucuggag

 - 69

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Evidence experimental; Solexa [1,3]

References

1
PMID:19917043 "MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing" Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B Anim Genet. 41:159-168(2010).
2
PMID:20180025 "Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue" Cho IS, Kim J, Seo HY, Lim do H, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS Mol Biol Rep. 37:3567-3574(2010).
3
PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).