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miRBase |
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Stem-loop sequence ssc-mir-181d |
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Accession | MI0013108 (change log) | |||||
Description | Sus scrofa miR-181d stem-loop | |||||
Gene family | MIPF0000007; mir-181 | |||||
Literature search |
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26 open access papers mention ssc-mir-181d | |||||
Stem-loop |
---- auca g ug g a a g 5' ucaca acauucauu u ucgguggguu ug g c g ||||| ||||||||| | |||||||||| || | | 3' ggugu uguaaguag g agccacccag ac c g a gguc -cac g -- - - - g |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence ssc-miR-181d-5p |
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Accession | MIMAT0013888 |
Previous IDs | ssc-miR-181d |
Sequence |
9 - aacauucauuguugucgguggguu - 32 |
Deep sequencing | 692 reads, 15 experiments |
Evidence | experimental; Illumina [1-4] |
Mature sequence ssc-miR-181d-3p |
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Accession | MIMAT0017375 |
Sequence |
50 - cccaccgagggaugaaugucac - 71 |
Deep sequencing | 1 reads, 1 experiments |
Evidence | experimental; Illumina [2-3] |
References |
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1 |
PMID:19917043
"MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing"
Anim Genet. 41:159-168(2010).
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2 |
PMID:20433717
"Deciphering the porcine intestinal microRNA transcriptome"
BMC Genomics. 11:275(2010).
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3 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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4 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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