Stem-loop sequence bta-mir-2888-1

AccessionMI0013062 (change log)
DescriptionBos taurus miR-2888-1 stem-loop
Literature search

2 open access papers mention bta-mir-2888-1
(2 sentences)

Stem-loop
   -----      u   ug ag -au      g     
5'      ccucuc ccc  c  c   cucagg cacu 
        |||||| |||  |  |   |||||| ||| g
3'      gggggg ggg  g  g   ggguuc gugu 
   gguug      u   gu gg gcu      a     
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Deep sequencing
34 reads, 10.5 reads per million, 19 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr21: 36262610-36262674 [+]
intergenic
Database links

Mature sequence bta-miR-2888

Accession MIMAT0013846
Sequence

47 - 

ggugggguggggggguugg

 - 65

Get sequence
Deep sequencing35 reads, 17 experiments
Evidence experimental; cloned [1]
Predicted targets

References

1
PMID:19765282 "Identification and characterization of miRNAs expressed in the bovine ovary" Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D BMC Genomics. 10:443(2009).