Stem-loop sequence osa-MIR2864

Accession

MI0013026 (change log)

Description

Oryza sativa miR2864 stem-loop

Literature search

3 open access papers mention osa-MIR2864
(6 sentences)

Stem-loop

   ucuauucag      c  c                 u     uagcaaua      uc 
5'          cuuuug ug ccuuguuuugcauugua aggua        ugccau  u
            |||||| || ||||||||||||||||| |||||        ||||||   
3'          gagaac ac ggaacaaaacgugacau uccau        acggug  g
   ---------      a  a                 c     --------      au 

Deep sequencing

32 reads, 0 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (MSU7): Chr12: 25664721-25664821 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013026

Mature sequence osa-miR2864.1

• Accession: MIMAT0013810
• Sequence: 11 - uuuugcugcccuuguuuugca - 31
• Deep sequencing: 4 reads, 1 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000334BC5_39947

Mature sequence osa-miR2864.2

• Accession: MIMAT0013811
• Sequence: 22 - uuguuuugcauuguauaggua - 42
• Deep sequencing: 19 reads, 2 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000360512_39947

References

1. PMID:19903869 "Rice MicroRNA effector complexes and targets" Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y Plant Cell. 21:3421-3435(2009).