Stem-loop sequence eca-mir-767

Accession MI0012986
Description Equus caballus miR-767 stem-loop
Gene family MIPF0000552; mir-767
Stem-loop 
gcuuuu   uuau             u c       uu  c      u    c 
      gua    agguuuuugcuca g accaugg  gu ugagca gcag a
      |||    ||||||||||||| | |||||||  || |||||| |||| u
      cgu    uccaaggacgagu c ugguacc  ca acucgu uguu g
gucauc   uacu             c u       -u  u      c    c
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Genome context
Coordinates (EquCab2) Overlapping transcripts
X: 120988447-120988554 [-]
sense
ENSECAT00000012058 ; GABRA3; intron 1
ENSECAT00000012058 ; F7B9Q2_HORSE; intron 1
ENSECAT00000012058 ; F7B9Q2_HORSE; intron 1
Clustered miRNAs
< 10kb from eca-mir-767
eca-mir-767 X: 120988447-120988554 [-]
eca-mir-105 X: 120986968-120987048 [-]
Database links
  • ENTREZGENE: 100314960;MIR767

Mature sequence eca-miR-767-5p

Accession MIMAT0013245
Sequence

27 -  

ugcaccaugguugucugagcaug

 - 49

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Evidence not experimental

Mature sequence eca-miR-767-3p

Accession MIMAT0013246
Sequence

61 -  

ucugcucauacuccaugguuccu

 - 83

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).