Stem-loop sequence eca-mir-505

Accession MI0012974
Description Equus caballus miR-505 stem-loop
Gene family MIPF0000217; mir-505
Stem-loop 
     ac    u           g    a        ucug 
gaugc  ccag gggggagccag aagu uugauguu    c
|||||  |||| ||||||||||| |||| ||||||||    c
cuacg  gguc cuccuuugguc uuca aacugcga    a
     -a    u           g    c        uuug
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Genome context
Coordinates (EquCab2) Overlapping transcripts
X: 111378309-111378392 [-]
intergenic
Database links
  • ENTREZGENE: 100315095;MIR505

Mature sequence eca-miR-505

Accession MIMAT0013229
Sequence

51 -  

cgucaacacuugcugguuuccu

 - 72

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).