Stem-loop sequence eca-mir-448

Accession MI0012964
Description Equus caballus miR-448 stem-loop
Gene family MIPF0000149; mir-448
Stem-loop 
------           u a            g   u     ga au    a       
      ggcggggaggu g acauccugcaua ugc gccag  a  cccc uuuuau 
      ||||||||||| | |||||||||||| ||| |||||  |  |||| ||||| a
      ccgccccucua c uguaggauguau acg ugguc  u  gggg agaauc 
cuucgc           c c            -   u     gg cg    -
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Genome context
Coordinates (EquCab2) Overlapping transcripts
X: 90871684-90871792 [+]
sense
ENSECAT00000022964 ; LOC100057852; intron 2
ENSECAT00000022964 ; F6PSU6_HORSE; intron 2
ENSECAT00000022964 ; F6PSU6_HORSE; intron 2
Database links
  • ENTREZGENE: 100315093;MIR448

Mature sequence eca-miR-448

Accession MIMAT0013218
Sequence

73 -  

uugcauauguaggaugucccau

 - 94

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).