Stem-loop sequence eca-mir-219-2

AccessionMI0012923 (change log)
DescriptionEquus caballus miR-219-2 stem-loop
Gene family MIPF0000044; mir-219
Stem-loop 
   a   a       c     u   u     aa           uac a  c 
5'  cuc ggggcuu gccac gau gucca  cgcaauucuug   g gu u
    ||| ||||||| ||||| ||| |||||  |||||||||||   | || g
3'  ggg ccucgag cggug cua caggu  guguuaagagc   c cg c
   -   -       u     u   -     cg           caa -  g
Get sequence
Deep sequencing
16 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (EquCab2.0; GCF_000002305.2) Overlapping transcripts
chr25: 31667362-31667458 [-]
intergenic
Database links

Mature sequence eca-miR-219-5p

Accession MIMAT0013099
Sequence

19 -  

ugauuguccaaacgcaauucu

 - 39

Get sequence
Deep sequencing32 reads, 1 experiments
Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).