Stem-loop sequence eca-mir-23b

Accession MI0012863
Description Equus caballus miR-23b stem-loop
Gene family MIPF0000027; mir-23
Stem-loop 
  c   u   --          -  c      gugacu 
gg ugc ugg  guuccuggca ug ugauuu      u
|| ||| |||  |||||||||| || ||||||       
cc acg acc  uagggaccgu ac acuaaa      a
  a   c   au          u  -      auuaga
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Genome context
Coordinates (EquCab2) Overlapping transcripts
23: 2317924-2317997 [-]
intergenic
Clustered miRNAs
< 10kb from eca-mir-23b
eca-mir-23b 23: 2317924-2317997 [-]
eca-mir-27b 23: 2317696-2317768 [-]
eca-mir-24-2 23: 2317177-2317244 [-]
Database links
  • ENTREZGENE: 100314890;MIR23B

Mature sequence eca-miR-23b

Accession MIMAT0013113
Sequence

46 -  

aucacauugccagggauuacc

 - 66

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).