Stem-loop sequence eca-mir-488

Accession MI0012718
Description Equus caballus miR-488 stem-loop
Gene family MIPF0000318; mir-488
Stem-loop 
    a  a   cu  c   u      a  c        g u 
gaga uc ucu  cc aga aauggc cu ucaaacaa u u
|||| || |||  || ||| |||||| || |||||||| | c
cucu ag aga  gg ucu uuaucg ga aguuuguu a c
    c  a   cu  u   -      -  a        g a
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Genome context
Coordinates (EquCab2) Overlapping transcripts
5: 12172407-12172489 [-]
sense
ENSECAT00000008170 ; LOC100062059; intron 5
Database links
  • ENTREZGENE: 100314813;MIR488

Mature sequence eca-miR-488

Accession MIMAT0012965
Sequence

52 -  

uugaaaggcuauuucuugguc

 - 72

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).