Stem-loop sequence eca-mir-346

Accession MI0012658
Description Equus caballus miR-346 stem-loop
Gene family MIPF0000188; mir-346
Stem-loop 
-g u      g ug    u    cu    -  aug        u  guug 
  g cucugu u  ggcg cugu  gccc gc   ccugccuc cu    c
  | |||||| |  |||| ||||  |||| ||   |||||||| ||     
  c gagacg g  ccgu gacg  cggg cg   ggacggag ga    u
gg -      - gu    c    uc    u  --g        -  aguc
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Genome context
Coordinates (EquCab2) Overlapping transcripts
1: 84117510-84117604 [+]
sense
ENSECAT00000029043 ; LOC100064635; intron 1
Database links
  • ENTREZGENE: 100314780;MIR346

Mature sequence eca-miR-346

Accession MIMAT0012902
Sequence

20 -  

ugucugcccgcaugccugccucu

 - 42

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Evidence not experimental

References

1
PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).