Stem-loop sequence mmu-mir-599

AccessionMI0012529 (change log)
Symbol MGI:Mir599
DescriptionMus musculus miR-599 stem-loop
Gene family MIPF0000502; mir-599
Literature search

2 open access papers mention mmu-mir-599
(2 sentences)

Stem-loop
   ugcu     -ca   ua         a        ----      a 
5'     gucca   gug  uuugauaag ugacauag    gagagg a
       |||||   |||  ||||||||| ||||||||    ||||||  
3'     uaggu   uac  aaacuauuu acuguguu    cuuucu c
   -cag     cca   cc         g        ucca      u 
Get sequence
Deep sequencing
101 reads, 60 reads per million, 15 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr15: 35660831-35660918 [-]
antisense
ENSMUST00000048646 ; Vps13b-201; intron 30
Clustered miRNAs
< 10kb from mmu-mir-599
mmu-mir-875chr15: 35660970-35661047 [-]
mmu-mir-599chr15: 35660831-35660918 [-]
Database links

Mature sequence mmu-miR-599

Accession MIMAT0012772
Sequence

55 - 

uugugucaguuuaucaaac

 - 73

Get sequence
Deep sequencing25 reads, 6 experiments
Evidence by similarity; MI0003611
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).