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miRBase |
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Stem-loop sequence mdo-mir-146a |
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Accession | MI0012502 (change log) | ||||
Description | Monodelphis domestica miR-146a stem-loop | ||||
Gene family | MIPF0000103; mir-146 | ||||
Stem-loop |
---------u c uu a c gucuu 5' guau uucagcu gagaacuga uu cauggguu u |||| ||||||| ||||||||| || |||||||| 3' uaua aggucga uucuugacu aa guauccag g cuacugucuc - -c c a acuau |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence mdo-miR-146a-5p |
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Accession | MIMAT0012746 |
Sequence |
15 - ugagaacugaauuccauggguu - 36 |
Deep sequencing | 135781 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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Mature sequence mdo-miR-146a-3p |
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Accession | MIMAT0026938 |
Sequence |
51 - ccuaugaaacucaguucuucag - 72 |
Deep sequencing | 3 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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