Stem-loop sequence bmo-mir-2772b

Accession MI0012327
Description Bombyx mori miR-2772b stem-loop
Gene family MIPF0000906; mir-2772
Stem-loop 
uucuu   -   -auc    -        -gu   ----     ca   ugg 
     ugc cuu    ucua aacucaaa   ggu    accag  gug   a
     ||| |||    |||| ||||||||   |||    |||||  |||    
     aug gag    aggu uugaguuu   ccg    ugguc  uac   u
ggugu   c   gucu    c        gug   uugc     --   ugg
Get sequence
Deep sequencing
1590 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
scaffold418: 172418-172513 [-]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-2772b
bmo-mir-2772b scaffold418: 172418-172513 [-]
bmo-mir-3326 scaffold418: 171271-171376 [+]

Mature sequence bmo-miR-2772b

Accession MIMAT0013653
Sequence

66 -  

uguuugaguucuggaucugga

 - 86

Get sequence
Deep sequencing 1577 reads, 3 experiments
Evidence experimental; Solexa [1]

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).