Stem-loop sequence bmo-mir-2745

Accession MI0012196
Description Bombyx mori miR-2745 stem-loop
Stem-loop 
a     g      -        uu        u   uuu 
 gugcc uugaug gcccgaaa  ccgaauuu agc   a
 ||||| |||||| ||||||||  |||||||| |||   u
 cacgg aacuau cgggcuuu  ggcuuaaa ucg   u
c     a      a        cu        -   uaa
Get sequence
Deep sequencing
6219 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf2210: 2415636-2415714 [-]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-2745
bmo-mir-2760 nscaf2210: 2415799-2415889 [-]
bmo-mir-2745 nscaf2210: 2415636-2415714 [-]

Mature sequence bmo-miR-2745

Accession MIMAT0012624
Sequence

47 -  

uaaauucggucuuucgggc

 - 65

Get sequence
Deep sequencing 6215 reads, 3 experiments
Evidence experimental; cloned [1], RT-PCR [1], SOLID [2]

References

1
PMID:19699294 "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome" Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J Genomics. 94:438-444(2009).
2
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).