Stem-loop sequence mtr-MIR2592o

AccessionMI0011822 (change log)
DescriptionMedicago truncatula miR2592o stem-loop
Gene family MIPF0000815; MIR2592
Literature search

1 open access papers mention mtr-MIR2592o
(2 sentences)

Stem-loop 
   u   gca         c  ca                         c  a            uc            a         gugag   u c         u      c     ccaccgaa ug   uu 
5'  ggg   aauucaaac ug  aaacaacaggacucaagcauuucgc aa caccucauguuu  ccuuugaaaaua uaaauuuuu     gcu g uuuagauga gguauu aagug        u  agg  c
    |||   ||||||||| ||  ||||||||||||||||||||||||| || ||||||||||||  |||||||||||| |||||||||     ||| | ||||||||| |||||| |||||        |  |||   
3'  ucc   uuaaguuug ac  uuuguuguccugaguucguaaagcg uu guggaguacaaa  ggaaacuuuuau auuuaaaaa     cga c aaaucuacu ccauaa uucac        a  ucc  a
   -   --a         a  ag                         -  c            ga            a         aaaua   c -         u      -     -------- gu   ua
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JCVI_Mt3.5.2) Overlapping transcripts
chr4: 34969555-34969812 [+]
intergenic
Database links

Mature sequence mtr-miR2592o-5p

Accession MIMAT0020943
Previous IDsmtr-miR2592o*
Sequence

25 -  

caacaggacucaagcauuucgc

 - 46

Get sequence
Evidence experimental; Illumina [2]

Mature sequence mtr-miR2592o-3p

Accession MIMAT0013275
Previous IDsmtr-miR2592o
Sequence

219 -  

aaaugcuugaguccuguuguu

 - 239

Get sequence
Evidence experimental; 454 [1], Illumina [2]

References

1
PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).
2
PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).