Stem-loop sequence dps-mir-2552

AccessionMI0011694 (change log)
DescriptionDrosophila pseudoobscura miR-2552 stem-loop
Stem-loop
        --    --------       a    u    -          a        -   gu 
5' guaua  uggu        uuuugga gaau guga ggucaaauug acgcauuu cga  a
   |||||  ||||        ||||||| |||| |||| |||||||||| |||||||| |||   
3' cgugu  accg        aaaaccu uuua uacu ccgguuuaau uguguaaa guu  u
        aa    cuacgagu       a    -    a          a        c   gu 
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (dpse_r2.26_FB2012_01) Overlapping transcripts
3: 8679230-8679342 [+]
intergenic
Clustered miRNAs
< 10kb from dps-mir-2552
dps-mir-25513: 8678482-8678601 [+]
dps-mir-25523: 8679230-8679342 [+]
dps-mir-3113: 8679717-8679827 [+]
dps-mir-92c3: 8679866-8679980 [+]
dps-mir-25533: 8680021-8680129 [+]
dps-mir-25063: 8680187-8680303 [+]
dps-mir-25543: 8680335-8680451 [+]
dps-mir-2507a3: 8680507-8680614 [+]
dps-mir-2507b3: 8680663-8680779 [+]
Database links

Mature sequence dps-miR-2552-5p

Accession MIMAT0012364
Previous IDsdps-miR-2552
Sequence

24 - 

ugaggucaaauugaacgcauuu

 - 45

Get sequence
Evidence experimental; Illumina [1]

Mature sequence dps-miR-2552-3p

Accession MIMAT0012365
Previous IDsdps-miR-2552*
Sequence

61 - 

auguguauaauuuggccaucaua

 - 83

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).