Stem-loop sequence dps-mir-2549

Accession MI0011691
Description Drosophila pseudoobscura miR-2549 stem-loop
Stem-loop 
     g  ucuuacaa   c  cga   a     ggcggu   u   -   uu       uc   u 
ccgag ug        gcc gu   gga gcuga      aag cac uga  ucuuuag  gcc a
||||| ||        ||| ||   ||| |||||      ||| ||| |||  |||||||  ||| c
ggcuc ac        cgg ca   ccu cgacu      uuc gug acu  aggaauc  ugg u
     g  -----uac   u  --a   -     ------   -   u   -u       --   u
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Genome context
Coordinates (dpse_r2.26_FB2012_01) Overlapping transcripts
XR_group8: 1815816-1815931 [+]
intergenic

Mature sequence dps-miR-2549-5p

Accession MIMAT0012358
Previous IDs dps-miR-2549*
Sequence

39 -  

guaagucacugauuucuuuagu

 - 60

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Evidence experimental; Solexa [1]

Mature sequence dps-miR-2549-3p

Accession MIMAT0012359
Previous IDs dps-miR-2549
Sequence

74 -  

uaaggauucaugugcuuucag

 - 94

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Evidence experimental; Solexa [1]

References

1
PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).