Stem-loop sequence dps-mir-2533

Accession MI0011667
Description Drosophila pseudoobscura miR-2533 stem-loop
Stem-loop 
c  ---ga   ug       u   cuu     agu    c       c    uc ucg 
 gc     ugu  gcuggag guu   cuggc   uggc ggcccau uucg  c   c
 ||     |||  ||||||| |||   |||||   |||| ||||||| ||||  |    
 cg     gcg  ugaccuc cgg   gaccg   gcug ccgggua gagc  g   u
-  auuug   gu       -   cuc     -gu    c       u    cu cac
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Genome context
Coordinates (dpse_r2.26_FB2012_01) Overlapping transcripts
Unknown_singleton_33: 114-225 [-]
intergenic
Clustered miRNAs
< 10kb from dps-mir-2533
dps-mir-2576-2 Unknown_singleton_33: 3769-3888 [+]
dps-mir-2533 Unknown_singleton_33: 114-225 [-]

Mature sequence dps-miR-2533

Accession MIMAT0012322
Sequence

23 -  

uucuggcaguuggccggcccauc

 - 45

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Evidence experimental; Solexa [1]

References

1
PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).