Stem-loop sequence dps-mir-959

Accession MI0011611
Description Drosophila pseudoobscura miR-959 stem-loop
Gene family MIPF0000910; mir-959
Stem-loop 
------uuuu     g uu       - u         g u        a ca    u 
          guuuu g  cuauguu c uaguacuug g ugauaaag c  cucg a
          ||||| |  ||||||| | ||||||||| | |||||||| |  |||| g
          cgaaa c  gauacaa g auuaugggc c acuguuuc g  gagu u
uaaaacaacg     a uc       c u         g u        c aa    g
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Genome context
Coordinates (dpse_r2.26_FB2012_01) Overlapping transcripts
4_group4: 3182613-3182724 [-]
intergenic
Clustered miRNAs
< 10kb from dps-mir-959
dps-mir-959 4_group4: 3182613-3182724 [-]
dps-mir-2563 4_group4: 3182462-3182572 [-]
dps-mir-2509 4_group4: 3182231-3182330 [-]
dps-mir-964 4_group4: 3181504-3181621 [-]

Mature sequence dps-miR-959-5p

Accession MIMAT0012257
Previous IDs dps-miR-959*
Sequence

22 -  

uuaguacuuggguugauaaaga

 - 43

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Evidence experimental; Solexa [1]

Mature sequence dps-miR-959-3p

Accession MIMAT0012258
Previous IDs dps-miR-959
Sequence

66 -  

uugucaucgcggguauuaugca

 - 87

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).