Stem-loop sequence hsa-mir-2277

Accession MI0011284
Description Homo sapiens miR-2277 stem-loop
Stem-loop 
gu     cu  g        g     u a      c     agcgcu 
  gcuuc  gc ggcugagc cgggc g gcgcug caguc      c
  |||||  || |||||||| ||||| | |||||| |||||       
  cgaag  cg ccggcucg guccg c cgcgac gucgg      a
cu     --  g        -     u c      a     aauuac
Get sequence
Deep sequencing
50 reads, 11 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr5: 92956402-92956494 [-]
sense
OTTHUMT00000369882 ; FAM172A-006; 3'UTR (exon 9)
OTTHUMT00000369882 ; FAM172A-006; 3'UTR (exon 9)
OTTHUMT00000369882 ; FAM172A-006; 3'UTR (exon 9)
OTTHUMT00000254100 ; FAM172A-001; 3'UTR (exon 11)
OTTHUMT00000254100 ; FAM172A-001; 3'UTR (exon 11)
OTTHUMT00000254100 ; FAM172A-001; 3'UTR (exon 11)
ENST00000505869 ; FAM172A-006; 3'UTR (exon 9)
ENST00000505869 ; FAM172A-006; 3'UTR (exon 9)
ENST00000505869 ; FAM172A-006; 3'UTR (exon 9)
ENST00000395965 ; FAM172A-001; 3'UTR (exon 11)
ENST00000395965 ; FAM172A-001; 3'UTR (exon 11)
ENST00000395965 ; FAM172A-001; 3'UTR (exon 11)
Database links

Mature sequence hsa-miR-2277-5p

Accession MIMAT0017352
Sequence

18 -  

agcgcgggcugagcgcugccaguc

 - 41

Get sequence
Deep sequencing 46 reads, 7 experiments
Evidence experimental; Solexa [2]
Predicted targets

Mature sequence hsa-miR-2277-3p

Accession MIMAT0011777
Previous IDs hsa-miR-2277
Sequence

59 -  

ugacagcgcccugccuggcuc

 - 79

Get sequence
Deep sequencing 4 reads, 4 experiments
Evidence experimental; 454 [1]
Predicted targets

References

1
PMID:19508715 "Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing" Nygaard S, Jacobsen A, Lindow M, Eriksen J, Balslev E, Flyger H, Tolstrup N, Moller S, Krogh A, Litman T BMC Med Genomics. 2:35(2009).
2
PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).