Stem-loop sequence hsa-mir-2276

Accession

MI0011282

Description

Homo sapiens miR-2276 stem-loop

Stem-loop

    -u  u   g   g -      u   c         gcu   u 
gugu  cu cca ucc c ccucug cac uugcagacg   uuc c
||||  || ||| ||| | |||||| ||| |||||||||   ||| u
uacg  ga ggu agg g ggagac gug aacgucugu   aag c
    uc  c   g   a c      u   -         ---   c 

Genome context

• Coordinates (GRCh37.p5): chr13: 24736555-24736643 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000044180 ; SPATA13-001; intron 1

  OTTHUMT00000335436 ; SPATA13-007; intron 1

  OTTHUMT00000335436 ; SPATA13-007; intron 1

  OTTHUMT00000044180 ; SPATA13-001; intron 1

  OTTHUMT00000335436 ; SPATA13-007; intron 1

  OTTHUMT00000044180 ; SPATA13-001; intron 1

  ENST00000466831 ; SPATA13-007; intron 1

  ENST00000382095 ; SPATA13-001; intron 1

  ENST00000382108 ; SPATA13-202; intron 1

  ENST00000466831 ; SPATA13-007; intron 1

  ENST00000382095 ; SPATA13-001; intron 1

  ENST00000382108 ; SPATA13-202; intron 1

  ENST00000466831 ; SPATA13-007; intron 1

  ENST00000382095 ; SPATA13-001; intron 1

  ENST00000382108 ; SPATA13-202; intron 1

Database links

• ENTREZGENE: 100313842;MIR2276

Mature sequence hsa-miR-2276

• Accession: MIMAT0011775
• Sequence: 54 - ucugcaagugucagaggcgagg - 75
• Evidence: experimental; 454 [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-2276
  • MICRORNA.ORG:hsa-miR-2276
  • MIRDB:hsa-miR-2276
  • RNA22-HSA:hsa-miR-2276
  • TARGETMINER:hsa-miR-2276

References

1. PMID:19508715 "Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing" Nygaard S, Jacobsen A, Lindow M, Eriksen J, Balslev E, Flyger H, Tolstrup N, Moller S, Krogh A, Litman T BMC Med Genomics. 2:35(2009).