Stem-loop sequence zma-MIR2118d

Accession MI0011274
Description Zea mays miR2118d stem-loop
Gene family MIPF0000745; MIR2118
Stem-loop 
      ---au g         a   g      g   a            aca  -g          ---      g 
gugagc     g aagaggaag gag gucuaa agc gugggcauggga   cg  aggaaggccu   augagu g
||||||     | ||||||||| ||| |||||| ||| ||||||||||||   ||  ||||||||||   |||||| a
cacucg     c uucuccuuc cuc uggauu uug uauccguacccu   gu  uccuucuggg   uacucg a
      guuuu g         -   g      g   c            -cc  ag          uuu      a
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Genome context
Coordinates (RefGen_v2) Overlapping transcripts
chr2: 49290225-49290372 [+]
intergenic
Clustered miRNAs
< 10kb from zma-MIR2118d
zma-MIR2118b chr2: 49290033-49290150 [+]
zma-MIR2118d chr2: 49290225-49290372 [+]

Mature sequence zma-miR2118d

Accession MIMAT0011763
Sequence

89 -  

uuccugaugccucccaugccua

 - 110

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Evidence not experimental

References

1
PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice" Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH Genome Res. 19:1429-1440(2009).