Stem-loop sequence osa-MIR2118p

Accession MI0011266
Description Oryza sativa miR2118p stem-loop
Gene family MIPF0000745; MIR2118
Stem-loop 
   g    ---           aaaa           ag              -a   g a     -gu     - ucu  uu          
gug guca   ggaagaggaag    gaguaccuaag  uagugggcauggga  cau g ggaaa   ucaaa c   uc  ccccucuaa 
||| ||||   |||||||||||    |||||||||||  ||||||||||||||  ||| | |||||   ||||| |   ||  |||||||| a
cac cggu   ccuucuccuuc    cucguggauuc  guuauccguacccu  gua c ccuuu   aguuu g   ag  ggggggauu 
   a    uuc           ----           cu              cc   g -     ugu     u uuc  cu
Get sequence
Deep sequencing
24 reads, 2 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr11: 7807433-7807606 [-]
intergenic
Clustered miRNAs
< 10kb from osa-MIR2118p
osa-MIR2118q Chr11: 7810709-7810885 [-]
osa-MIR2118r Chr11: 7810223-7810397 [-]
osa-MIR2118p Chr11: 7807433-7807606 [-]

Mature sequence osa-miR2118p

Accession MIMAT0011755
Sequence

115 -  

uucccgaugccucccaugccua

 - 136

Get sequence
Deep sequencing 3 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice" Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH Genome Res. 19:1429-1440(2009).