Stem-loop sequence ppc-mir-2238b-2

Accession MI0011217
Description Pristionchus pacificus miR-2238b-2 stem-loop
Gene family MIPF0000822; mir-2238
Stem-loop 
    - u     gccga    c gu      cu  c      -  ua 
ggaa c agucu     cuuc c  cuacuc  uu gucauu ga  c
|||| | |||||     |||| |  ||||||  || |||||| ||  g
ccuu g ucaga     gaag g  ggugag  aa caguaa cu  a
    c u     ---ag    a ug      cu  -      g  ua
Get sequence
Deep sequencing
11 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Ppa_Contig39: 506080-506170 [+]
intergenic

Mature sequence ppc-miR-2238b

Accession MIMAT0011682
Sequence

54 -  

aaugacaaucgagugggugag

 - 74

Get sequence
Deep sequencing 12 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).