Stem-loop sequence ppc-mir-2262

Accession MI0011188
Description Pristionchus pacificus miR-2262 stem-loop
Stem-loop 
-    a      uugacc    aa     a  a        cc  ug  a      gua 
 gaau aauguu      cucg  ugacg gu cccgaugu  ag  gu ccuucu   u
 |||| ||||||      ||||  ||||| || ||||||||  ||  || ||||||   u
 cuua uugcga      gagu  acugu ca gggcuaca  uc  ca ggaaga   g
u    a      -----u    -a     c  c        uu  cu  -      aga
Get sequence
Deep sequencing
2 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Ppa_Contig5: 1065458-1065570 [-]
intergenic

Mature sequence ppc-miR-2262

Accession MIMAT0011688
Sequence

31 -  

uacccgauguccagugguaccuu

 - 53

Get sequence
Deep sequencing 2 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).