Stem-loop sequence ppc-mir-236

Accession MI0011165
Description Pristionchus pacificus miR-236 stem-loop
Stem-loop 
     --    aa a     c   -     c    c        -  ------- a      cg 
gugga  aguc  g cgaga guc uuaca gaca guauugga gu       g gucccc  u
|||||  ||||  | ||||| ||| ||||| |||| |||||||| ||       | ||||||   
uaucu  ucag  c gcucu cag aaugu cugu cauaaucu cg       c cagggg  c
     ac    -- -     u   u     a    -        a  uauaaau a      ac
Get sequence
Deep sequencing
15 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Ppa_Contig65: 75168-75282 [-]
intergenic

Mature sequence ppc-miR-236

Accession MIMAT0011672
Sequence

78 -  

uaauacugucauguaaugacuuc

 - 100

Get sequence
Deep sequencing 15 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).