Stem-loop sequence crm-mir-246-2

Accession MI0011096
Description Caenorhabditis remanei miR-246-2 stem-loop
Gene family MIPF0000260; mir-246
Stem-loop 
a    aaacaaua       a    g     uu            gaa 
 gucc        gaacagc ccug ccgau  cauguaauaucu   a
 ||||        ||||||| |||| |||||  ||||||||||||   a
 uagg        uuugucg ggau ggcua  guacauuauaga   g
-    -aaaugag       a    g     -u            aaa
Get sequence
Deep sequencing
21 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Crem_Contig20: 644631-644726 [+]
intergenic

Mature sequence crm-miR-246-5p

Accession MIMAT0011571
Previous IDs crm-miR-246
Sequence

21 -  

accuggccgauuucauguaauau

 - 43

Get sequence
Deep sequencing 28 reads, 1 experiments
Evidence experimental; 454 [1]

Mature sequence crm-miR-246-3p

Accession MIMAT0011572
Previous IDs crm-miR-246*
Sequence

60 -  

uuacauguaucggguaggag

 - 79

Get sequence
Deep sequencing 14 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).