Stem-loop sequence sbi-MIR169n

AccessionMI0010879 (change log)
DescriptionSorghum bicolor miR169n stem-loop
Gene family MIPF0000012; MIR169_1
Literature search

4 open access papers mention sbi-MIR169n
(23 sentences)

Stem-loop
   -   -         u    u     uauccucuaugaaggaucagca 
5'  ggu agccaagga gacu gccua                      a
    ||| ||||||||| |||| |||||                      a
3'  ccg ucgguuccu cuga cgggu                      u
   u   a         -    -     acucuggugaguuucggagcua 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sorghum_bicolor_NCBIv3; GCA_000003195.3) Overlapping transcripts
chr7: 62255445-62255537 [+]
intergenic
Clustered miRNAs
< 10kb from sbi-MIR169n
sbi-MIR169lchr7: 62246903-62246999 [-]
sbi-MIR169mchr7: 62252290-62252381 [-]
sbi-MIR169nchr7: 62255445-62255537 [+]
Database links

Mature sequence sbi-miR169n

Accession MIMAT0011339
Sequence

3 - 

uagccaaggaugacuugccua

 - 23

Get sequence
Evidence by similarity; MI0001127

References

1
PMID:19189423 "The Sorghum bicolor genome and the diversification of grasses" Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare Nature. 457:551-556(2009).