Stem-loop sequence sme-mir-36c

Accession MI0010802
Description Schmidtea mediterranea miR-36c stem-loop
Stem-loop 
aauuuca  -       -  c  -   u    caa     uu     cga   g 
       ac auaaauu ag ga uga uguc   cuggu  ggugu   guu a
       || ||||||| || || ||| ||||   |||||  |||||   |||  
       ug uauuuaa uc cu acu acag   ggcca  cuacg   uaa a
cucuaac  c       a  u  u   u    aug     --     ---   a
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Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig3934: 37302-37403 [+]
intergenic
Clustered miRNAs
< 10kb from sme-mir-36c
sme-mir-36c Contig3934: 37302-37403 [+]
sme-mir-36a Contig3934: 37835-37920 [+]

Mature sequence sme-miR-36c-5p

Accession MIMAT0012158
Previous IDs sme-miR-36c*
Sequence

19 -  

cgaugauuguccaacugguuu

 - 39

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Evidence experimental; Solexa [1-2]

Mature sequence sme-miR-36c-3p

Accession MIMAT0011261
Previous IDs sme-miR-36c
Sequence

61 -  

ucaccggguagacauucauu

 - 80

Get sequence
Evidence experimental; 454 [1], Solexa [1-2]

References

1
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).
2
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).