Stem-loop sequence sme-mir-2161

Accession MI0010795
Description Schmidtea mediterranea miR-2161 stem-loop
Stem-loop 
--uuuuccu   u     a a        u                 cuu  u 
         uug cugua u guaucuuu uuauuacguacaaaaug   gc u
         ||| ||||| | |||||||| |||||||||||||||||   ||  
         aac gauau a uauggaga aaugaugcguguuuuac   ug a
cugcuauuu   u     a c        u                 agu  g
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Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig33: 107534-107639 [+]
intergenic

Mature sequence sme-miR-2161-5p

Accession MIMAT0012152
Previous IDs sme-miR-2161*
Sequence

20 -  

guaucuuuuuuauuacguacaaa

 - 42

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Evidence experimental; Solexa [1-2]

Mature sequence sme-miR-2161-3p

Accession MIMAT0011255
Previous IDs sme-miR-2161
Sequence

65 -  

ugugcguaguaauagagguauc

 - 86

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Evidence experimental; 454 [1], Solexa [1-2]

References

1
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).
2
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).