Stem-loop sequence sme-mir-87c

Accession MI0010768
Description Schmidtea mediterranea miR-87c stem-loop
Stem-loop 
----guucuc   u    uc c              gg  cc  gc     c 
          ggc cgug  g agucaauugauaau  gc  ca  cauuc a
          ||| ||||  | ||||||||||||||  ||  ||  ||||| g
          ccg guac  u ucaguuaacuauua  cg  gu  guaag g
ucuacuguua   -    cu -              aa  -a  -a     c
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Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig2469: 10412-10510 [+]
intergenic

Mature sequence sme-miR-87c-5p

Accession MIMAT0012133
Previous IDs sme-miR-87c*
Sequence

20 -  

gucaauugauaaugggcccca

 - 40

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Evidence experimental; 454 [1], Solexa [1-2]

Mature sequence sme-miR-87c-3p

Accession MIMAT0011228
Previous IDs sme-miR-87c
Sequence

58 -  

augagcaaauuaucaauugacu

 - 79

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Evidence experimental; 454 [1], Solexa [1-2]

References

1
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).
2
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).