Stem-loop sequence sme-mir-61b

Accession MI0010767
Description Schmidtea mediterranea miR-61b stem-loop
Stem-loop 
----caaa    cg   ac  a     uc   -u        a       g 
        gcgg  auu  ac gaaga  gug  cguucuag uuacaug a
        ||||  |||  || |||||  |||  |||||||| |||||||  
        cgcc  uaa  ug uuucu  cac  guaagauc aguguau u
ucuacuag    --   ga  a     uc   uu        -       a
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Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig3451: 4512-4607 [+]
intergenic

Mature sequence sme-miR-61b-5p

Accession MIMAT0012132
Sequence

20 -  

aagaucgugucguucuagauua

 - 41

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Evidence experimental; 454 [1], Solexa [1-2]

Mature sequence sme-miR-61b-3p

Accession MIMAT0011227
Sequence

54 -  

ugacuagaauguucaccuucuuu

 - 76

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Evidence experimental; 454 [1], Solexa [1-2]

References

1
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).
2
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).