Stem-loop sequence hsa-mir-2114

Accession

MI0010633

Description

Homo sapiens miR-2114 stem-loop

Gene family

MIPF0001464; mir-2114

Stem-loop

  u   u   ccu        c     a  -g    gaua 
cc cca gcu   agucccuu cuuga gc  gucg    a
|| ||| |||   |||||||| ||||| ||  ||||     
gg ggu cga   ucagggaa gaacu cg  cagu    u
  u   -   acu        c     c  ag    acac 

Deep sequencing

2 reads, 2 experiments

Genome context

• Coordinates (GRCh37.p5): chrX: 149396239-149396318 [+]
• Overlapping transcripts:

  intergenic

Database links

• ENTREZGENE: 100313839;MIR2114

Mature sequence hsa-miR-2114-5p

• Accession: MIMAT0011156
• Previous IDs: hsa-miR-2114
• Sequence: 13 - uagucccuuccuugaagcgguc - 34
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; 454 [1], Solexa [2]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-2114-5p
  • MICRORNA.ORG:hsa-miR-2114-5p
  • MIRDB:hsa-miR-2114-5p
  • RNA22-HSA:hsa-miR-2114-5p
  • TARGETMINER:hsa-miR-2114-5p

Mature sequence hsa-miR-2114-3p

• Accession: MIMAT0011157
• Previous IDs: hsa-miR-2114*
• Sequence: 49 - cgagccucaagcaagggacuu - 69
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; 454 [1], Solexa [2]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-2114-3p
  • MICRORNA.ORG:hsa-miR-2114-3p
  • MIRDB:hsa-miR-2114-3p
  • RNA22-HSA:hsa-miR-2114-3p
  • TARGETMINER:hsa-miR-2114-3p

References

1. PMID:19390579 "Repertoire of microRNAs in epithelial ovarian cancer as determined by next generation sequencing of small RNA cDNA libraries" Wyman SK, Parkin RK, Mitchell PS, Fritz BR, O'Briant K, Godwin AK, Urban N, Drescher CW, Knudsen BS, Tewari M PLoS One. 4:e5311(2009).
2. PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).