Stem-loop sequence osa-MIR2103

Accession

MI0010564 (change log)

Description

Oryza sativa miR2103 stem-loop

Literature search

1 open access papers mention osa-MIR2103
(1 sentences)

Stem-loop

   cggc     -----        u   u   - ---g      g 
5'     gccuu     uuucccuc ccg gcg c    cucgcc g
       |||||     |||||||| ||| ||| |    ||||||  
3'     cggag     agagggag ggc cgu g    gagcgg c
   ----     aacag        -   -   a guag      c 

Deep sequencing

8 reads, 0 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (MSU7): Chr12: 16852565-16852637 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0010564

Mature sequence osa-miR2103

• Accession: MIMAT0010071
• Sequence: 10 - uuucccucuccgugcgcgcucg - 31
• Evidence: experimental; Illumina [1]

References

1. PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds" Xue LJ, Zhang JJ, Xue HW Nucleic Acids Res. 37:916-930(2009).