Stem-loop sequence ppt-MIR2083

AccessionMI0010537 (change log)
DescriptionPhyscomitrella patens miR2083 stem-loop
Gene family MIPF0000996; MIR899
Stem-loop 
   aaaaguguguguaugcggaaguuggagaaaacccagacuucauugcucgaugaagcauguagcuucgcagucgua            c  c          u uc   cgcauugugguucuccaacaccugcacagcggcggucuuguccggauuagggaucgucuacaccagauaagccacg 
5'                                                                            cuucuugcacuc uc aucucucgca c  uug                                                                            g
                                                                              |||||||||||| || |||||||||| |  |||                                                                            c
3'                                                                            gaagaacgugag ag uagagagugu g  gac                                                                            g
   --------------------------------------------------acgcagaccuuguaccuuucuccca            c  u          c uu   ccgucccaacauaggcuugcaccuuuugcgucguuggcaacaacuugguuuccuaccauaaaaagaggcucuuuuu
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Confidence Annotation confidence: not enough data
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Database links

Mature sequence ppt-miR2083-5p

Accession MIMAT0010022
Sequence

77 -  

uucuugcacuccuccaucucu

 - 97

Get sequence
Evidence experimental; Illumina [1]

Mature sequence ppt-miR2083-3p

Accession MIMAT0010023
Sequence

277 -  

agauugacgagugcaagaaga

 - 297

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:19096705 "Physcomitrella patens DCL3 is required for 22-24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development" Cho SH, Addo-Quaye C, Coruh C, Arif MA, Ma Z, Frank W, Axtell MJ PLoS Genet. 4:e1000314(2008).