Stem-loop sequence ppt-MIR2080

AccessionMI0010532 (change log)
DescriptionPhyscomitrella patens miR2080 stem-loop
Stem-loop 
   -------g         uguuaag g                                         uuu 
5'         cugcguguu       u agaaauuccauaucaauucgcagaugccgcuucagaacugg   u
           |||||||||       | |||||||||||||||||||||||||||||||||||||||||   a
3'         gaugugcag       g ucuuuaagguauaguuaagcgucuacggcgaagucuugacc   c
   cgauuugg         ------- g                                         uug
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (v3.0) Overlapping transcripts
Chr09: 2064958-2065086 [+]
intergenic
Database links

Mature sequence ppt-miR2080

Accession MIMAT0010017
Sequence

26 -  

uccauaucaauucgcagaugc

 - 46

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:19096705 "Physcomitrella patens DCL3 is required for 22-24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development" Cho SH, Addo-Quaye C, Coruh C, Arif MA, Ma Z, Frank W, Axtell MJ PLoS Genet. 4:e1000314(2008).