Stem-loop sequence ppt-MIR2079

AccessionMI0010531 (change log)
DescriptionPhyscomitrella patens miR2079 stem-loop
Stem-loop 
   auauaa     a  ua  ----                                         g 
5'       guacu au  au    uuaugcgucaucaacaucaacucuucauaguuauuauauaa u
         ||||| ||  ||    |||||||||||||||||||||||||||||||||||||||||  
3'       uauga ua  ua    aauacgcaguaguuguaguugagaaguaucaauaauauauu a
   ---uag     a  gc  caaa                                         c
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (v3.0) Overlapping transcripts
Chr07: 2829022-2829144 [+]
intergenic
Database links

Mature sequence ppt-miR2079

Accession MIMAT0010016
Sequence

81 -  

agaguugauguugaugacgca

 - 101

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:19096705 "Physcomitrella patens DCL3 is required for 22-24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development" Cho SH, Addo-Quaye C, Coruh C, Arif MA, Ma Z, Frank W, Axtell MJ PLoS Genet. 4:e1000314(2008).