Stem-loop sequence bfl-mir-2059

Accession MI0010494
Description Branchiostoma floridae miR-2059 stem-loop
Stem-loop 
cauuuguguuggacc              uu c          u  a 
               ccuuucaaggcaaa  g ugcaauacuu gu u
               ||||||||||||||  | |||||||||| || c
               ggaaaguuucguuu  u acguuaugaa cg c
--------------u              uu c          -  u
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Deep sequencing
1 reads, 1 experiments
Genome context
Coordinates (JGI2.0) Overlapping transcripts
Bf_V2_109: 1619205-1619286 [+]
intergenic

Mature sequence bfl-miR-2059-5p

Accession MIMAT0019168
Sequence

21 -  

caaggcaaauugcugcaauacu

 - 42

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Deep sequencing 1 reads, 1 experiments
Evidence experimental; 454 [2]

Mature sequence bfl-miR-2059-3p

Accession MIMAT0009985
Previous IDs bfl-miR-2059
Sequence

57 -  

uauugcacuuuuuugcuuuga

 - 77

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Evidence experimental; cloned [1], 454 [2]

References

1
PMID:19196332 "Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution" Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L Evol Dev. 11:41-49(2009).
2
PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).