Stem-loop sequence bta-mir-1197

Accession MI0010470
Description Bos taurus miR-1197 stem-loop
Gene family MIPF0000126; mir-379
Stem-loop 
-----cuucc       -u     cgc   u       gug g    - uuu 
          ugguauu  gaaga   ggu gaccaug   u uacg c   a
          |||||||  |||||   ||| |||||||   | |||| |   u
          acuauag  cuucu   uca cugguac   g augc g   u
ccgcuucuac       cu     ---   u       aca g    a uau
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Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr21: 67565299-67565395 [+]
intergenic
Clustered miRNAs
< 10kb from bta-mir-1197
bta-mir-379 chr21: 67561869-67561954 [+]
bta-mir-411a chr21: 67563098-67563179 [+]
bta-mir-299 chr21: 67563570-67563632 [+]
bta-mir-380 chr21: 67564803-67564863 [+]
bta-mir-411b chr21: 67564957-67565031 [+]
bta-mir-1197 chr21: 67565299-67565395 [+]
bta-mir-323 chr21: 67565468-67565553 [+]
bta-mir-758 chr21: 67565766-67565853 [+]
bta-mir-329b chr21: 67566507-67566589 [+]
bta-mir-329a chr21: 67566817-67566899 [+]
bta-mir-494 chr21: 67569676-67569760 [+]
bta-mir-1193 chr21: 67570008-67570112 [+]
bta-mir-543 chr21: 67571825-67571904 [+]
bta-mir-495 chr21: 67573235-67573315 [+]
bta-mir-154c chr21: 67575252-67575326 [+]
Database links

Mature sequence bta-miR-1197

Accession MIMAT0009966
Sequence

56 -  

uaggacacauggucuacuucu

 - 76

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Evidence not experimental

References

1
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).