Stem-loop sequence cfa-mir-496

Accession MI0010405
Description Canis familiaris miR-496 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
---------aguca      u   u        u     gu         uua 
              gguacu gaa ggagguug ccaug  guguucauu   u
              |||||| ||| |||||||| |||||  |||||||||    
              ucauga cuu ccucuaac gguac  uaugaguag   u
ggguucuucuuaaa      -   u        c     au         uau
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Genome context
Coordinates (CanFam2) Overlapping transcripts
chr8: 72332143-72332240 [+]
antisense
Clustered miRNAs
< 10kb from cfa-mir-496
cfa-mir-487a chr8: 72323811-72323890 [+]
cfa-mir-382 chr8: 72325856-72325912 [+]
cfa-mir-134 chr8: 72326229-72326301 [+]
cfa-mir-485 chr8: 72326972-72327030 [+]
cfa-mir-496 chr8: 72332143-72332240 [+]
cfa-mir-377 chr8: 72333670-72333738 [+]
cfa-mir-409 chr8: 72336515-72336568 [+]
cfa-mir-369 chr8: 72336806-72336861 [+]
cfa-mir-410 chr8: 72337110-72337165 [+]

Mature sequence cfa-miR-496

Accession MIMAT0009906
Sequence

52 -  

ugaguauuacauggccaaucuc

 - 73

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Evidence by similarity; MI0003136
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).