Stem-loop sequence cfa-mir-487a

Accession MI0010401
Description Canis familiaris miR-487a stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
      u     g   uua      c    -    cu  a 
gguacu gaaga ugg   ucccug ugug uucg  gu u
|||||| ||||| |||   |||||| |||| ||||  ||  
cuauga uuuuu acc   agggac auac aagc  ua u
      c     g   uac      -    u    ag  u
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Genome context
Coordinates (CanFam2) Overlapping transcripts
chr8: 72323811-72323890 [+]
antisense
Clustered miRNAs
< 10kb from cfa-mir-487a
cfa-mir-376a-1 chr8: 72313992-72314049 [+]
cfa-mir-300 chr8: 72314548-72314625 [+]
cfa-mir-381 chr8: 72317716-72317790 [+]
cfa-mir-487b chr8: 72318229-72318286 [+]
cfa-mir-539 chr8: 72319044-72319119 [+]
cfa-mir-544 chr8: 72320389-72320477 [+]
cfa-mir-487a chr8: 72323811-72323890 [+]
cfa-mir-382 chr8: 72325856-72325912 [+]
cfa-mir-134 chr8: 72326229-72326301 [+]
cfa-mir-485 chr8: 72326972-72327030 [+]
cfa-mir-496 chr8: 72332143-72332240 [+]
cfa-mir-377 chr8: 72333670-72333738 [+]

Mature sequence cfa-miR-487a

Accession MIMAT0009902
Sequence

49 -  

aaucauacagggacauccagu

 - 69

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Evidence by similarity; MI0005022
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).